Foldon fusion of RBD and S1 fragments of SARS‐CoV‐2 to stabilize the structure of subunit protein as a vaccine candidate

https://doi.org/10.22146/ijbiotech.82159

Gracia Christine Lembong Purwanto(1), Fedric Intan Damai(2), Dian Fitria Agustiyanti(3), Popi Hadi Wisnuwardhani(4), Alfi Taufik Fathurahman(5), Yana Rubiyana(6), Ratna Dwi Ramadani(7), Muhammad Khairul Lisan Sidqi(8), Pekik Wiji Prasetyaningrum(9), Endah Puji Septisetyani(10), Dadang Supriatna(11), Ratih Asmana Ningrum(12), Wien Kusharyoto(13), Ihsan Tria Pramanda(14), Andri Wardiana(15*)

(1) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN), Indonesia; Department of Biotechnology, School of Life Sciences, Indonesian International Institute for Life Sciences
(2) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN), Indonesia; Department of Biotechnology, School of Life Sciences, Indonesian International Institute for Life Sciences
(3) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(4) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(5) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(6) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(7) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(8) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(9) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(10) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(11) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(12) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(13) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(14) Department of Biotechnology, School of Life Sciences, Indonesian International Institute for Life Sciences
(15) Research Centre for Genetic Engineering, National Research and Innovation Agency (BRIN)
(*) Corresponding Author

Abstract


The COVID‐19 pandemic threatened public health around the world at the same time as highlighting the urgency of vaccine development. Subunit vaccines are safe and effective vaccine types that utilize parts of viruses to trigger the body’s immune response. Previous research has shown that fusion of the spike protein with the foldon domain (fd) achieved the trimeric form to increase the protein stability of the recombinant subunit protein spike from SARS‐CoV and MERS‐CoV, thus exceeding the immune response in the body. The study aims to observe the expression of RBD‐fd and S1‐fd recombinant proteins from the spike protein of SARS‐CoV‐2 in CHO‐K1 mammalian cells and investigate the binding activity of those proteins with hACE2 receptor, expressed in HEK293T cells using immunofluorescence staining. The plasmids were transiently transfected into the cells, followed by antibiotic selection using G418 as an initial stage to select the positive stable transformants. Protein expression was confirmed by Western blotting and showed an estimated size for monomeric RBD‐fd of 35 kDa and S1‐fd of 55 kDa. However, the trimeric form of the proteins was not observed. In addition, immunofluorescence staining showed the binding activity between the RBD‐fd and S1‐fd proteins and hACE2 expressing cell line, revealing binding and an internalization process.


Keywords


CHO‐K1; Foldon; RBD; SARS‐CoV‐2; Spike

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References

Cheung WY, Hovey O, Gobin JM, Muradia G, Mehic J, Westwood C, Lavoie JR. 2018. Efficient nonviral transfection of human bone marrow mesenchymal stromal cells shown using placental growth factor overexpression. Stem Cells Int. 2018:1310904. doi:10.1155/2018/1310904.

Chong P, Huang JH, Leng CH, Liu SJ, Chen HW. 2015. Recombinant lipoproteins as novel vaccines with intrinsic adjuvant. Adv. Protein Chem. Struct. Biol. 99:55–74. doi:10.1016/bs.apcsb.2015.03.003.

Creech CB, Walker SC, Samuels RJ. 2021. SARS-CoV-2 Vaccines. JAMA - J. Am. Med. Assoc. 325(13):1318. doi:10.1001/jama.2021.3199. Dhama K, Khan S, Tiwari R, Sircar S, Bhat S, Malik YS, Singh KP, Chaicumpa W, Bonilla-Aldana DK, Rodriguez-Morales AJ. 2020. Coronavirus Disease 2019–COVID-19. Clin. Microbiol. Rev. 33(4):e00028–20. doi:10.1128/cmr.00028-20.

Gong Y, Qin S, Dai L, Tian Z. 2021. The glycosylation in SARS-CoV-2 and its receptor ACE2. Signal Transduct. Target. Ther. 6(1):396. doi:10.1038/s41392- 021-00809-8.

He J, Tao H, Yan Y, Huang SY, Xiao Y. 2020. Molecular mechanism of evolution and human infection with SARS-CoV-2. Viruses 12(4):428. doi:10.3390/v12040428.

Hsieh CL, Goldsmith JA, Schaub JM, DiVenere AM, Kuo HC, Javanmardi K, Le KC, Wrapp D, Lee AG, Liu Y, Chou CW, Byrne PO, Hjorth CK, Johnson NV, Ludes-Meyers J, Nguyen AW, Park J, Wang N, Amengor D, Lavinder JJ, Ippolito GC, Maynard JA, Finkelstein IJ, McLellan JS. 2020. Structure-based design of prefusion-stabilized SARSCoV-2 spikes. Science 369(6510):1501–1505. doi:10.1126/SCIENCE.ABD0826.

Kang SY, Kim YG, Kang S, Lee HW, Lee EG. 2016. A novel regulatory element (E77) isolated from CHOK1 genomic DNA enhances stable gene expression in Chinese hamster ovary cells. Biotechnol. J. 11(5):633–641. doi:10.1002/biot.201500464.

Kashte S, Gulbake A, El-Amin SF, Gupta A. 2021. COVID-19 vaccines: Rapid development, implications, challenges and future prospects. Hum. Cell 34(3):711–733. doi:10.1007/s13577-021-00512-4.

Li YD, Chi WY, Su JH, Ferrall L, Hung CF, Wu TC. 2020. Coronavirus vaccine development: from SARS and MERS to COVID-19. J. Biomed. Sci. 27:104. doi:10.1186/s12929-020-00695-2.

Mahmood T, Yang PC. 2012. Western blot: Technique, theory, and trouble shooting. N. Am. J. Med. Sci. 4(9):429–434. doi:10.4103/1947-2714.100998.

Mahmuda M, Al Jannah S, Fibriani A, Ningrum RA, Wardiana A. 2023. Structure-based design of recombinant spike subunit vaccine for coronavirus diseases. Int. J. Adv. Sci. Eng. Inf. Technol. 13(1):130–140. doi:10.18517/ijaseit.13.1.16202.

O’Flaherty R, Bergin A, Flampouri E, Mota LM, Obaidi I, Quigley A, Xie Y, Butler M. 2020. Mammalian cell culture for production of recombinant proteins: A review of the critical steps in their biomanufacturing. Biotechnol. Adv. 43:107552. doi:10.1016/j.biotechadv.2020.107552.

Omasa T, Onitsuka M, Kim WD. 2010. Cell engineering and cultivation of Chinese hamster ovary (CHO) cells. Curr. Pharm. Biotechnol. 11(3):233– 240. doi:10.2174/138920110791111960.

Saifudin N, Ibrahim N, Anuar N. 2011. Optimization in transfection and stable production of p-galactosidase in chinese hamster ovary cells. Biotechnology 10(1):86–93. doi:10.3923/biotech.2011.86.93.

Semaan SM, Wang X, Marshall AG, Sang QXA. 2012. Identification of potential glycoprotein biomarkers in estrogen receptor positive (ER+) and negative (ER-) human breast cancer tissues by LC-LTQ/FTICR mass spectrometry. J. Cancer 3:269–284. doi:10.7150/jca.4592.

Shang Y, Chen F, Li S, Song L, Gao Y, Yu X, Zheng J. 2021. Investigation of interaction between the spike protein of SARS-CoV-2 and ACE2-expressing cells using an in vitro cell capturing system. Biol. Proced. Online 23:16. doi:10.1186/s12575-021-00153-9.

Tai W, Zhao G, Sun S, Guo Y, Wang Y, Tao X, Tseng CTK, Li F, Jiang S, Du L, Zhou Y. 2016. A recombinant receptor-binding domain of MERS-CoV in trimeric form protects human dipeptidyl peptidase 4 (hDPP4) transgenic mice from MERS-CoV infection. Virology 499:375–382. doi:10.1016/j.virol.2016.10.005.

Tan E, Chin CSH, Lim ZFS, Ng SK. 2021. HEK293 cell line as a platform to produce recombinant proteins and viral vectors. Front. Bioeng. Biotechnol. 9:796991. doi:10.3389/fbioe.2021.796991.

Tripathi NK, Shrivastava A. 2019. Recent developments in bioprocessing of recombinant proteins: expression hosts and process development. Front. Bioeng. Biotechnol. 7:420. doi:10.3389/fbioe.2019.00420.

Yadav T, Srivastava N, Mishra G, Dhama K, Kumar S, Puri B, Saxena SK. 2020. Recombinant vaccines for COVID-19. Hum. Vaccines Immunother. 16(12):2905–2912. doi:10.1080/21645515.2020.1820808.



DOI: https://doi.org/10.22146/ijbiotech.82159

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