Genetic Diversity and Albumin Content of Striped Snakehead Channa striata in Indonesia: A Study on Farmed and Wild Fish from Five Main Islands

  • Rohana Hidayati Aquaculture Laboratory, Fisheries Department, Faculty of Agriculture, Universitas Gadjah Mada; Directorate General of Aquaculture, Ministry of Marine Affairs and Fisheries, The Republic of Indonesia
  • Purwanto Department of Pharmaceutical Biology, Faculty of Pharmacy, Universitas Gadjah Mada
  • Rustadi Aquaculture Laboratory, Fisheries Department, Faculty of Agriculture, Universitas Gadjah Mada https://orcid.org/0000-0003-2960-533X
  • Ignatius Hardaningsih Aquaculture Laboratory, Fisheries Department, Faculty of Agriculture, Universitas Gadjah Mada
  • Murwantoko Fish Disease and Environmental Laboratory, Fisheries Department, Faculty of Agriculture, Universitas Gadjah Mada https://orcid.org/0000-0002-1584-7576
  • Dini Wahyu Kartika Sari Aquaculture Laboratory, Fisheries Department, Faculty of Agriculture, Universitas Gadjah Mada; Biotechnology Research Center, Universitas Gadjah Mada
Keywords: Albumin, Aquaculture, Channa striata, COI, Indonesia, mtDNA

Abstract

Genetic characterisation and key traits of species are crucial in determining the direction of aquaculture development. The genetic diversity of the striped snakehead (Channa striata) across five main islands in Indonesia, both from aquaculture and wild populations, was explored through its partial mtDNA COI. Subsequently, this study examined the albumin content extracted from the meat and comprehensively aligned it with the variation in its genotype. Phylogenetic studies showed the Sumatran snakehead fish sample forms its own cluster and has a large genetic distance from other samples. Interestingly, the albumin content in the Sumatra samples was significantly higher (1.907 %) than in others (1.253-1.509 %). Further analysis of albumin content from the Borneo samples from the same taxa in the phylogenetic tree showed no significant difference between farmed and wild C. striata. The findings of this study are fundamental for initiating a selective breeding programme and developing conservation management.

References

Ab Wahab, S.Z. et al., 2015. The Effect of Channa striatus (Haruan) extract on pain and wound healing of post-lower segment caesarean section women. Evidence-Based Complementary and Alternative Medicine, 2015, 849647. doi: 10.1155/2015/849647

Adamson, E.A.S., Hurwood, D.A., & Mather, P.B., 2010. A reappraisal of the evolution of Asian snakehead fishes (Pisces, Channidae) using molecular data from multiple genes and fossil calibration. Molecular Phylogenetics and Evolution, 56(2), pp.707–717. doi: 10.1016/j.ympev.2010.03.027

Ambak, M.A. et al., 2006. Genetic variation of snakehead fish (Channa striata) populations using Random Amplified Polymorphic DNA. Biotechnology, 5(1), pp.104–110. doi: 10.3923/biotech.2006.104.110

Andreeva, A.M., 2010. Structure of fish serum albumins. Journal of Evolutionary Biochemistry and Physiology, 46(2), pp.135–144. doi: 10.1134/S0022093010020018

Aryani et al., 2020. Profile of kerandang fish (Channa pleurophthalmus Blkr) proteins from Central Kalimantan. IOP Conference Series: Earth and Environmental Science, 441, 012091. doi: 10.1088/1755-1315/441/1/012091

Asfar, M. et al., 2019. Extraction of albumin of a snakehead fish (Channa striata) at its isoelectric point. Jurnal Agercolere, 1(1), pp.6–12.

Bashar, A. et al., 2020. Ichthyo-diversity assessment of the Old Brahmaputra river, Bangladesh: present stance and way forward. Heliyon, 6(11), e05447. doi: 10.1016/j.heliyon.2020.e05447

Bloch, M.E., 1793. Naturgeschichte der auslandischen Fische, Berlin : Auf Kosten des Verfassers und in Commission bei dem Buchhändler Hr. Hesse

Courtenay, W.R., & Williams, J.D., 2004. Snakeneads (Pisces, Channidae) - A Biological Synopsis and Risk Assessment. Colorado, U.S. Geological Survey. doi: 10.3133/cir1251

Fatma, N. et al., 2020. The protein and albumin contents in some species of marine and brackishwater fish of South Sulawesi, Indonesia. AACL Bioflux, 13(4), pp.1976–1985.

Froese, R. & Pauly, D., 2010, FishBase: world wide web electronic publication, viewed from http://www.fishbase.org.

Gam, L., Leow, C. & Baie, S., 2006. Proteomic analysis of snakehead fish (Channa striata) muscle tissue. Malaysian Journal of Biochemistry and Molecular Biology, 14, pp.25–32.

Hardaningsih, I. et al., 2025. Genetic Variation of Giant Gourami (Osphronemus goramy Lacepède 1801) in Indonesia: Insights from Morphometric and Mitochondrial DNA COI Analysis. Genetics of Aquatic Organisms, 9(1), GA887. doi: 10.4194/GA887

Laemmli, U.K., 1970. Cleavage of structural protein during the assembly of the head of bacteriophage T4. Nature, 227(5259), pp.680–685. doi: 10.1038/227680a0.

Maillou, J. & Nimmo, I. A., 1993. Identification and some properties of an albumin-like protein in the serum of pre-spawning Atlantic salmon (Salmo salar). Comparative Biochemistry and Physiology -- Part B: Biochemistry And, 104(2), pp.401–405. doi: 10.1016/0305-0491(93)90386-J

Nugroho, M., 2013. Uji biologis ekstrak kasar dan isolat albumin ikan gabus (Ophiocephalus striatus) terhadap berat badan dan kadar serum albumin tikus mencit. Jurnal Saintek Perikanan, 9(1), pp.49–54. doi: 10.35891/tp.v5i1.495

Ramdhani, D. et al., 2019. Characterization of the physicochemical properties of albumin extract of snakehead fish (Ophiocephalus striatus) from rivers in Indonesia as a source of alternative albumin nutrients in raw materials for pharmaceutical products. International Research Journal of Pharmacy, 10(3), pp.84–87. doi: 10.7897/2230-8407.100384

Song, L.M. et al., 2013. Characterisation of Asian snakehead murrel Channa striata (Channidae) in Malaysia: An insight into molecular data and morphological approach. The Scientific World Journal, 2013, 917506. doi: 10.1155/2013/917506

Tamura, K. et al., 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28(10), pp.2731–2739. doi: 10.1093/molbev/msr121

Tan, M.P., Jamsari, A.F.J. & Siti Azizah, M.N., 2012. Phylogeographic pattern of the striped snakehead, Channa striata in Sundaland: Ancient river connectivity, geographical and anthropogenic singnatures. PLoS ONE, 7(12), e52089. doi: 10.1371/journal.pone.0052089

The Ministry of Marine Affairs and Fisheries of the Republic of Indonesia., 2018. Marine and Fisheries in Figures 2018. Jakarta, Pusat Data, Statistik, dan Informasi.

Wasko, A.P. et al., 2003. Nondestructive genetic sampling in fish: An improved method for DNA extraction from fish fins and scales. Hereditas, 138, pp.161-165. doi: 10.1034/j.1601-5223.2003.01503.x.

Published
2026-02-23
How to Cite
Hidayati, R., Purwanto, Rustadi, Hardaningsih, I., Murwantoko and Sari, D. W. K. (2026) “Genetic Diversity and Albumin Content of Striped Snakehead Channa striata in Indonesia: A Study on Farmed and Wild Fish from Five Main Islands”, Journal of Tropical Biodiversity and Biotechnology, 11(1), p. jtbb22616. doi: 10.22146/jtbb.22616.
Section
Research Articles