Upregulation of Glucomannan Synthesis Genes in Porang (Amorphophallus muelleri Blume) after Polyploidy Induction using Colchicine
Abstract
Inducing polyploidy in porang using colchicine has been explored and successfully enhanced the genetic variability of porang. However, the specific impact of polyploidy on the expression of the genes responsible for glucomannan synthesis in porang has not been extensively studied. Therefore, this study aims to evaluate the effect of polyploidy induction on the expression of genes responsible for glucomannan synthesis in porang. Porang shoot explants (2n = 26) were used for polyploidy induction. Polyploidy induction was carried out using colchicine added to the culture medium. The concentrations of colchicine used in this study were 0 %, 0.01 %, 0.02 %, 0.03 %, and 0.04 %. After 53 days in media without colchicine, explants were collected for flow cytometry analysis and RNA isolation. The application of colchicine at various concentrations induced tetraploid and mixoploid porang. Mutation induction using colchicine also increases the expression (upregulation) of the CSLA, GMPP, CSLD, and GMPP genes encoding glucomannan biosynthesis in porang. Tetraploid (0.01 % colchicine treatment) and mixoploid porang (0.02 % colchicine treatment) showed the highest expression of genes involved in glucomannan biosynthesis via both sucrose and invertase pathways.
References
A’yun, Q. Harijati, N. & Mastuti, R., 2019. The selection technique of bulbil porang (Amorphophallus muelleri Blume) based on growth response. Journal of Environmental Engineering & Sustainable Technology, 06(01), pp.30-35. doi: 10.21776/ub.jeest.2019.006.01.5
Ahmadi, N. et al., 2022. Glucomannan as a dietary supplement for treatment of breast cancer in a mouse model. Vaccines, 10(10), 1746. doi: 10.3390/vaccines10101746
Amah, D. et al., 2019. Effects of in vitro polyploidization on agronomic characteristics and fruit carotenoid content; implications for banana genetic improvement. Frontiers in Plant Science, 10, 1450. doi: 10.3389/fpls.2019.01450
Anatskaya, O.V. & Vinogradov, A.E., 2022. Polyploidy as a fundamental phenomenon in evolution, development, adaptation and diseases. International Journal of Molecular Sciences, 23(7), 3542. doi: 10.3390/ijms23073542.
Barron, R. et al., 2020 Development of an in vitro method of propagation for Artemisia tridentata subsp. tridentata to support genome sequencing and genotype-by-environment research. Plants (Basel), 5(12), 1717. doi: 10.3390/plants9121717
Bhuvaneswari, G., Thirugnanasampandan, R. & Gogulramnath, M., 2020. Effect of colchicine induced tetraploidy on morphology, cytology, essential oil composition, gene expression and antioxidant activity of Citrus limon (L.) Osbeck. Physiology and Molecular Biology of Plants, 26(2), pp.271–279. doi: 10.1007/s12298-019-00718-9
Coleman, H. D. et al., 2007. Over-expression of UDP-glucose pyrophosphorylase in hybrid poplar affects carbon allocation. Journal of Experimental Botany, 58, pp.4257–4268. doi: 10.1093/jxb/erm287
Corneillie, S. et al., 2019. Polyploidy affects plant growth and alters cell wall composition. Plant Physiology, 179(1), pp.74-87. doi: 10.1104/pp.18.00967
Diao, Y. et al., 2014. De novo transcriptome and small rna analyses of two Amorphophallus species. Plos One, 9(4), e95428. doi: 10.1371/journal.pone.0095428
Eng, W.H., Ho, W.S. & Ling, K.H., 2021. In vitro induction and identification of polyploid Neolamarckia cadamba plants by colchicine treatment. PeerJ, 27(9), e12399. doi: 10.7717/peerj.12399.
Ermayanti, T.M., Wijayanta A.N. & Ratnadewi D. 2018. Induksi poliploidi pada tanaman talas (Colocasia esculenta (L.) Schott) kultivar kaliurang dengan perlakuan kolkisin secara in vitro. Jurnal Biologi Indonesia. 14(1), pp.91-102.
Gao, Y. et al., 2022. A chromosome-level genome assembly of Amorphophallus konjac provides insights into konjac glucomannan biosynthesis. Computational and Structural Biotechnology Journal, 20, pp.1002-1011. doi: 10.1016/j.csbj.2022.02.009
Gille, S., Cheng, K. & Skinnerm, M.E., 2011. Deep sequencing of voodoo lily (Amorphophallus konjac): an approach to identify relevant genes involved in the synthesis of the hemicellulose glucomannan. Planta, 234, pp.515–526. doi: 10.1007/s00425-011-1422-z
Goubet, F. et al., 2009. Cell wall glucomannan in Arabidopsis is synthesised by CSLA glycosyltransferases, and influences the progression of embryogenesis. The Plant Journal, 60, pp.527-538. doi: 10.1111/j.1365-313X.2009.03977.x
Hassan, J. et al., 2020. Tetraploid induction by colchicine treatment and crossing with a diploid reveals less-seeded fruit production in pointed gourd (Trichosanthes dioica Roxb.). Plants, 9(3), 370. doi: 10.3390/plants9030370.
Hassanzadeh, F., Zakaria, R.A. & Azad, N.H., 2020. Polyploidy induction in Salvia officinalis L. and its effects on some morphological and physiological characteristics. Cytologia, 85(2), pp.157-162. doi: 10.1508/cytologia.85.157
Heo, J.Y. et al., 2016. Polyploidy production in Lilium leichtlinii var. maximowiczii using colchicine. The Journal of Animal & Plant Sciences, 26, pp.1111–1116.
Irianto, H., Riptanti, W. & Mujiyo, 2023. A sustainable porang (Amorphophallus muelleri Blume) farming model to support export increase: empirical study in Wonogiri Regency, Indonesia. Applied Ecology and Environmental Research, 21(4), pp.3419-3443. doi: 10.15666/aeer/2104_34193443
Javadian, N. et al., 2017. In vitro polyploidy induction: changes in morphology, podophyllotoxin biosynthesis, and expression of the related genes in Linum album (Linaceae). Planta, 245, pp.1165–1178. doi: 10.1007/s00425-017-2671-2
Jeloudar, N.I. et al., 2019. Induction and identification of polyploidy by colchicine treatment in Lilium regale. Cytologia, 84(3), pp. 271-276. doi: 10.1508/cytologia.84.271
Ma, M. et al., 2025. Regulation of transcriptional homeostasis by DNA methylation upon genome duplication in pak choi. Molecular Horticulture, 5, 22. doi: 10.1186/s43897-025-00145-3
Madani, H., Hosseini, B. & Dehghan, E., 2015. Enhanced production of scopolamine in induced autotetraploid plants of Hyoscyamus reticulatus L. Acta Physiologiae Plantarum, 37, 55. doi: 10.1007/s11738-015-1795-x
Manzoor, A. et al., 2019. Studies on colchicine induced chromosome doubling for enhancement of quality traits in ornamental plants. Plants, 8(7), 194. doi: 10.3390/plants8070194
Marisa, M., Zhang, C. & Chen, Z.J., 2012. Ploidy and hybridity effects on growth vigor and gene expression in Arabidopsis thaliana hybrids and their parents. Gene Genome Genetics, 2(4), pp.505–513. doi: 10.1534/g3.112.002162
Mehravi, S. et al., 2022. Mixed-ploidy and dysploidy in hypericum perforatum: a karyomorphological and genome size study. Plants, 11(22), 3068. doi: 10.3390/plants11223068
Mohammadi, V. et al., 2023. The effect of induced polyploidy on phytochemistry, cellular organelles and the expression of genes involved in thymol and carvacrol biosynthetic pathway in thyme (Thymus vulgaris). Frontiers in Plant Science, 15, 1228844. doi: 10.3389/fpls.2023.1228844.
Mondin, M. et al., 2018. In vitro induction and regeneration of tetraploids and mixoploids of two cassava cultivars. Crop Breeding and Applied Biotechnology, 18, pp.176-183. doi: 10.1590/1984-70332018v18n2a25
Nilanthi, D. et al., 2009. Induction of tetraploids from petiole explants through colchicine treatments in Echinacea purpurea L. Journal of Biomedicine and Biotechnology, 20, 343485. doi: 10.1155/2009/343485.
Parsons, J.L. et al., 2019. Polyploidization for the genetic improvement of Cannabis sativa. Frontiers in Plant Science, 10, 476. doi: 10.3389/fpls.2019.00476
Qi, L. et al., 2022. Glucomannan in Dendrobium catenatum: bioactivities, biosynthesis and perspective Genes, 13(11), 1957. doi: 10.3390/genes13111957
Sabooni, N. & Gharaghani, A., 2022. Induced polyploidy deeply influences reproductive life cycles, related phytochemical features, and phytohormonal activities in blackberry species. Frontiers in Plant Science, 12(13), 938284. doi: 10.3389/fpls.2022.938284
Sabzehzari, M. et al., 2019. Morphological, anatomical, physiological, and cytological studies in diploid and tetraploid plants of Plantago psyllium. Plant Cell, Tissue and Organ Culture, 139(1), 131. doi: 10.1007/s11240-019-01670-y
Salama, A.M. & Naguib, M.I., 1963. Effect of colchicine on the carbohydrate metabolism of mycelial felts of cunninghamella Sp. Archiv für Mikrobiologie, 46, pp.296-304. doi: 10.1007/BF00422190
Smith, A., & Rahardjo, S., 2021. The rising demand for porang in global markets: a comprehensive study. Journal of International Agricultural Trade, 15(3), pp.45-60.
Suyono et al., 2023. Induction of synthetic polyploids of porang (Amorphophallus muelerri Blume) and assessment of its genetic variability using morphological data and RAPD molecular marker. Journal of Tropical Biodiversity and Biotechnology, 8(5), jtbb82238. doi: 10.22146/jtbb.82238
Tammu, R.M., Nuringtyas, T.R. & Daryono B.S., 2021. Colchicine effects on the ploidy level and morphological characters of Katokkon pepper (Capsicum annuum L.) from North Toraja, Indonesia. Journal of Genetic Engineering and Biotechnology 19(1), 31. doi: 10.1186/s43141-021-00131-4
Touchell, D.H., Palmer, I.E. & Ranney, T.G., 2020. In vitro ploidy manipulation for crop improvement. Frontiers in Plant Science, 3(11), 722. doi: 10.3389/fpls.2020.00722.
Wahyudi, D., Azrianingsih, R. & Mastuti, R., 2013. Genetic variability of porang populations (Amorphophallus muelleri) in West Java and Central Java based on trnL intron sequences. Journal of Biodiversity and Environmental Sciences, 3, pp.31-41
Wang, K. et al., 2017. Cloning and evaluation of reference genes for quantitative real-time PCR analysis in Amorphophallus. PeerJ, 5, e3260. doi: 10.7717/peerj.3260
Wang, L. et al., 2024. Colchicine-induced tetraploidy in protocorms of Aerides rosea Lodd. ex Lindl. and Paxton. and its identification. Plants, 13(24), 3535. doi: 10.3390/plants13243535
Widoretno, W. et al., 2023. In vitro induction and identification of polyploid Amorphophallus muelleri Blume plants by colchicine treatment. AGRIVITA Journal of Agricultural Science, 45(1), pp.87–97. doi: 10.17503/agrivita.v45i1.3992.
Wu, Y. et al., 2021. Change in sucrose cleavage pattern and rapid starch accumulation govern lily shoot-to-bulblet transition in vitro. Frontiers in Plant Science, 14(11), 564713. doi: 10.3389/fpls.2020.564713.
Yang, J. et al., 2020. Biochemical and genetic analysis identify CSLD3 as a beta-1,4-glucan synthase that functions during plant cell wall synthesis. Plant Cell, 5, pp.1749-1767.
Zhang, W. et al., 2022. Preparation and performance of thickened liquids for patients with konjac glucomannan-mediated dysphagia. Molecules, 27(7), 2194. doi: 10.3390/molecules27072194.
Zhou, K. et al., 2017. Transcriptome analysis reveals plant response to colchicine treatment during on chromosome doubling. Scientific Reports, 7(1), 8503. doi: 10.1038/s41598-017-08391-2.

