Detection of 16S Mitochondrial Gene Polymorphism on Barb Fish (Barbodes binotatus Valenciennes, 1842) from Lake Lebo Taliwang, West Nusa Tenggara
Tuty Arisuryanti(1*), Astin Alfianti(2), Nadya Ulfa Nida' Firdaus(3), Lukman Hakim(4)
(1) Laboratory of Genetics and Breeding, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia
(2) Laboratory of Genetics and Breeding, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia
(3) Laboratory of Genetics and Breeding, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia
(4) Laboratory of Genetics and Breeding, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia
(*) Corresponding Author
Abstract
Keywords
Full Text:
PDFReferences
Arisuryanti, T., G.A. Pratama, L. Hakim, J.P. Koentjana & F.K. Nazira. 2019a. Genetic characterization of kissing gourami (Helostoma temminckii Cuvier, 1829) in Ogan River, South Sumatra inferred from 16S rRNA and COI mitochondrial genes. Indones. Fish. Res. J. 25 (1): 37-44
Arisuryanti, T., R.L. Hasan, K.L. Ayu, N. Ratman & L. Hakim. 2019b. Genetic identification of freshwater fish species from Lake Lebo Taliwang, West Nusa Tenggara through DNA barcoding. J. Tropical Biodiversity Biotechnology 4 (3): 107-112
Cawthorn, D.M., H.A. Steinman & R.C. Witthuhn. 2012. Evaluation of the 16S and 12S rRNA genes as universal markers for the identification of commercial fish species in South Africa. Gene 491 (1): 40-48
Fišer Pečnikar, Ž. & E.V. Buzan. 2013. 20 years since the introduction of DNA barcoding: from theory to application. J. Appl. Genet. 55 (1): 43-52
Haryani, G. 2013, Kondisi danau di Indonesia dan strategi pengselolaannya. Prosiding Pertemuan Ilmiah Tahunan Masyarakat Limnologi Indonesia. I: 1-19.
Jahan, H., M. Akter, R.A. Begum & R.Md. Shahijahan. 2017. Identification and comparison of three carp fishes based on mitochondrial 16S rRNA gene. Dhaka Univ. J. Biol. Sci. 26 (2): 167-174
Keat-Chuang, C., P. A. Ooi, W. L. Wong, & G. Khoo. 2018. Ichthyofauna checklist (Chordata: Actinopterygii) for indicating water quality in Kampar River catchment, Malaysia. Biodiversitas 19 (6): 2252-2274
Kottelat, M. 2013. The fishes of the inland waters of Southeast Asia: A catalogue and core bibliography of the fishes known to occur in freshwaters, mangroves and estuaries. Raffles B. Zool. Supplement. 27: 1-663
Kumar, S., G. Stecher & K. Tamura. 2016. MEGA7: molecular evolutionary genetic analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33 (7): 1870-1874
Leigh, J.W. & D. Bryant. 2015. POPOART: full-feature software for haplotype network construction. Methods Ecol. Evol. 6: 1110-1116
Lim, L.S., W.K. Chor, R.F. Firdaus, L. Malitam, J. Ransangan & R. Shapawi. 2015. Proximate and amino acid compositions of the pond-cultured spotted barb, Puntius binotatus. Malaysian Journal of Science. 34 (2): 168-171
Maddison, W.P. & D.R. Maddison. 2018. Mesquite: A modular system for evolutionary analysis. Version 3.51 (http://www.mesquiteproject.org)
Malakar, A.K., W.S. Lakra, M. Singh, M. Goswami & R.M. Mishra. 2009. Genetic characterization of three Ompok species using mitochondrial DNA sequences. J. Indian Fish Assoc. 36: 65-82
Palumbi, S.R. 1996. Nucleic acids II: The polymerase chain reaction. In: Molecular systematics, (Eds.) D.M. Hillis, C.Moritz, B.K. Mable, Sinauer Associates. Sunderland. Massachusetts. p. 205
RIPED, 2008, Lebo Taliwang, kekayaan flora dan fauna Sumbawa Barat, viewed 27 February 2019, http://konservasi4lebotaliwang.blogspot.com.
Rozas, J., A. Ferrer-Matta, J.C. Sanchez-DelBarrio, S. Guirao-Rico, P. Librado, S.E. Ramos-Onsins & A. Sanchez-Gracia. 2017. DnaSP 6: DNA sequence polymorphism analysis of large datasets. Mol. Biol. Evol. 32 (12): 3299-3302
Saad, Y.M. 2019. Analysis of 16S mitochondrial ribosomal DNA sequence variations and phylogenetic relations among some Serranidae fishes. S. Afr. J. Anim. Sci. 49(1): 80-89
Saad, Y.M., A.K.M. Shaikh Omar & W.M. Gharbawi. 2019. Evaluation of molecular diversity in some Red sea parrotfish species based on mitochondrial 16S ribosomal RNA gene sequence variations. Res. J. Biotechnol. 14 (12): 8-21
Yang, L., T. Zongqing, D. Wang, L. Xue, M. Guan, T. Huang & R. Li. 2013. Species identification through mitochondrial rRNA genetic analysis. Sci. Rep. 14: 1-11
DOI: https://doi.org/10.22146/jfs.54064
Article Metrics
Abstract views : 3419 | views : 3099Refbacks
- There are currently no refbacks.
Copyright (c) 2020 Jurnal Perikanan Universitas Gadjah Mada
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.
Jurnal Perikanan Universitas Gadjah Mada (print ISSN 0853-6384; online ISSN 2502-5066) is published by Department of Fisheries, Universitas Gadjah Mada in collaboration with Semnaskan UGM (Seminar Nasional Tahunan Hasil Perikanan dan Kelautan) and ISMFR (International Symposium on Marine and Fisheries Research).
View My Stats