Polymorphisms KIF12 GENE|BfaI and its Association on Carcass Characteristics and Lamb Meat Quality
Raudah Putri Ekawati(1), Ratna Sholatia Harahap(2), Kasita Listyarini(3), Cece Sumantri(4), Asep Gunawan(5*)
(1) Department of Animal Production and Technology, Faculty of Animal Science, IPB University, Bogor, 16680,
(2) Department of Animal Production and Technology, Faculty of Animal Science, IPB University, Bogor, 16680,
(3) Department of Animal Production and Technology, Faculty of Animal Science, IPB University, Bogor, 16680,
(4) Department of Animal Production and Technology, Faculty of Animal Science, IPB University, Bogor, 16680,
(5) Department of Animal Production and Technology, Faculty of Animal Science, IPB University, Bogor, 16680,
(*) Corresponding Author
Abstract
One of gene which involves on mediation an antioxidant cascade in beta cells as an intracellular target of excess fat intake is Kinesin Family 12 (KIF12). This study aims to identify the diversity of SNP g. 9617965 C>T KIF12 and association with carcass characteristic and meat quality. The total sample used were 102 ram DNA samples consisted of 10 barbados cross sheep (BCS), 52 javanese thin tail (JTT), 15 jonggol sheep (JS), 15 garut sheep (GS), and 10 compass agrinak sheep (CAS). Identification of the diversity of KIF12|BfaI was conducted using the Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) method. The results showed that the amplification product was 696 bp. The diversity of the KIF12 gene was found three genotypes namely CC, CT, and TT. The allele frequency in all types of sheep was in Hardy-Weinberg equilibrium. A SNP of the KIF12 was associated (P<0.05) with characteristic of carcass, including length of carcass. The association of KIF12 with meat quality was significant (P<0.05) too associated with pH and water holding capasity (WHC). It could be concluded that KIF12 gene is a potential candidate gene for carcass characteristic and meat quality traits in sheep
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Agop, N. C., B. Naissant, R. F. Ben, M. Rauch, A. Kretzchmar, and S. Thiberge. 2009. Rab11A conrolled assembly of the inner membrane complex is required for completion of apicomplexan cytokinesis. Plos. Pathogen 5: 1-15.
Anwar, P., Jiyanto, and M. A. Santi. 2019. Persentase karkas, bagian karkas dan lemak abdominal broiler dengan suplementasi andaliman (Zanthoxylum acanthopodium DC) di dalam ransum. Journal of Tropical Animal Production 20: 172-178.
Bardakci, F. 2001. Random amplified polymorphic DNA (RAPD) markers. Turk. J. Biol. 25: 185-196.
Chen, G., R. A. Cue, K. Lundstrom, J. D. Wood, and O. Doran. 2008. Regulation of YP2A6 protein expression by skatole, indole, and testicular steroids in primary cultured pig hepatocytes. Drug Metab. Dispos. 36: 56-60.
Dagong, M. I. A., R. Herman, C. Sumantri, R. R. Noor, and M. Yamin. 2012. Karakteristik karkas dan sifat fisik daging domba ekor tipis (DET) berdasarkan variasi genotip gen kalpastatin (CAST) (lokus intron 5-ekson 6). Jurnal Ilmu Ternak Veteriner 17: 13-24.
Dewi, S. H. C. 2012 Korelasi antara kadar glikogen, asam laktat, pH daging dan susut masak daging domba setelah pengangkutan. Jurnal Agri Sains 4: 59-70.
Fan, B., Z. Q. Du, and M. F. Rothschild. 2010. The hepatocyte nuclear factor-1 alpha (HNF1A) gene is associated with fatness and loin muscle area in the pig. Animal 4: 1619-1627.
Gong, Y., Z. Ma, V. Patel, E. Fischer, T. Hicsberger, and M. Pontoglio. 2009. HNF-1ß regulates transcription of the PKD modifier gene KIF12. J. Am. Soc. Nephrol. 20: 7-41.
Gunawan, A., R. S. Harahap, K. Listyarini, and C. Sumantri. 2019. Identifikasi keragaman gen DGAT1 serta asosiasinya terhadap karakteristik karkas dan kualitas perlemakan domba. Jurnal Ilmu dan Teknologi Peternakan Tropis 6: 259-266.
Gunawan, A., S. Tazkya, K. Listyarini, M. Yamin, I. Inounu, and C. Sumantri. 2018. Karakteristik gen KIF12 (Kinesin Familly 12) serta hubungannya dengan komposisi asam lemak pada domba. Jurnal Ilmu dan Teknologi Peternakan Tropis 5: 88-94.
Hilmia, N., D. Rahmat, P. Edianingsih, and Y. Faisal. 2022. Komparasi bobot potong, bobot karkas, dan persentase karkas pada sapi rancah dan peranakan ongole berdasarkan mutasi pada gen leptin. ZIRAA’AH 47: 137-141.
Khasanah, H., A. Gunawan, R. Priyanto, M. F. Ulum, and Jakaria. 2016. Polymorphism of myostatin (MSTN) promoter gene and its association with growth and muscling traits in bali cattle. Media Peternakan 39: 95-103.
Lakshmikanth, G. S., H. M. Warrick, and J. A. Spudich. 2004. A mitotic kinesin-like protein required for normal karyokinesis, myosin localization to the furrow and cytokinesisin dictystelium. Proc. Natl. Acad. Sci. 101: 16519.
Lapian, M. T. R., P. H. Siagian, W. Manalu, and P. Priyanto. 2013. Kualitas karkas babi potong yang dilahirkan dari indukan yang disuperovulasi sebelum pengawinan. Jurnal Veteriner 14: 350-357.
Lawrie, R. A. 2003. Ilmu Daging. Universitas Indonesia. Jakarta, Indonesia.
Listyarini, K., Jakaria, M. J. Uddin, C. Sumantri, and A. Gunawan. 2018. Association and expression of CYP2A6 and KIF12 genes related to lamb flavour and odour. Trop. Anim. Sci. J. 41: 100-107.
Noor, R. R. 2010. Genetika Ternak. Penebar Swadaya. Jakarta, Indonesia.
Ockerman, H. W. 1983. Chemistry of Meat Tissue 10th edn. Ohio State University. Ohio, United State.
Organization for Economic Co-operation and Development. 2021. Meat consumption. https://data.oecd.org/agroutput/meat-consumption.htm. (9 April 2022).
Rahmat, D., Dudi, and S. P. Y. Paryati. 2017. Pengaruh keragaman gen DGAT1 terhadap kadar kolesterol dan trigeliserida darah domba padjadjaran. Journal of Animal Husbandry Science 2: 1-7.
Rai, P., M. Kumara, G. Sharmab, P. Baraka, S. Dasb, S. S. Kamatcd, and R. Mallika. 2017. Kinesin dependent mechanism for controlling triglyceride secretion from the liver. PNAS. 114: 12958-12963.
Rosita, A. Husni, R. Riyanti, and D. Septianova. 2019. Pengaruh perendaman daging sapi dalam berbagai konsentrasi blend jahe (Zingiber officinale rosceo) terhadap pH, daya ikat air, dan susut masak. Jurnal Riset dan Inovasi Peternakan 3: 31-37.
Sambrook, J. and D. W. Russell. 2001. Molecular Cloning: A Laboratory Manual. 3rd ed, Vol. 1, Cold Spring Harbor Laboratory Press, New York.
Stalke, A., M. Sgodda, T. Cantz, B. Skawran, E. Lainka, B. Hartleben, U. Baumann, andE. D. Pfister. 2021. KIF12 variants and disturbed hepatocyte polarity in children with a phenotypic spectrum of cholestatic liver disease. The Journal of Pediatrics 240: 1-8.
Suantika, R. L., Suryaningsih, and J. Gumilar. 2017. Pengaruh lama perendaman dengan menggunakan sari jahe terhadap kualitas fisik (daya ikat air, keempukan, dan pH) daging domba. Jurnal Ilmu Ternak 17: 67-72.
Sugeng, Y. B. 2003. Sapi Potong. Penebar Swadaya, Jakarta.
Suryadi, S., S. Rahayu, C. Firmansyah, and S. Kuswaryan. 2016. Preferensi konsumen terhadap daging domba di Jawa Barat. Sosiohumaniora 18: 27-33.
Suryadi, U. 2006. Pengaruh bobot potong terhadap kualitas dan hasil karkas sapi Brahman Cross. J. Indonesian Trop. Anim. Agric. 31: 21-27.
Yang, W., Y. Tanaka, M. Bundo, and N. Hirokawa. 2014. Antioksidant signaling involving the microtubule motor KIF12 is an intracellular target if nutrition excess in beta cells. Developmental Cell. 31: 202-214.
DOI: https://doi.org/10.21059/buletinpeternak.v46i4.77029
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